ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8dsmD1 - ECOD Domain | ECOD

ECOD/Domains/e8dsmD1

e8dsmD1

UID: 003074258

PDB

Range: D:161-485
PDB: 8DSM chain D(all domains)

Molecule: Nicotinamide phosphoribosyltransferase

3D Structure

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Related Domains

Browse other domains in NAPRTase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupNicotinate/Quinolinate PRTase C-terminal domain-like(2002.4)

TT-groupNicotinate/Quinolinate PRTase C-terminal domain-like(2002.4.1)

FFamilyNAPRTase(2002.4.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
(3S)-N-[(1-benzothiophen-5-yl)methyl]-1-[6-(4-{2-[(2E)-3-(pyridin-3-yl)prop-2-enamido]ethyl}phenyl)thieno[2,3-d]pyrimidin-4-yl]piperidine-3-carboxamideTK0

+ 2 additives (Glycerin, Phosphate ion)

GlycerinGOL

Pfam Families

PF04095NAPRTase

Nicotinate phosphoribosyltransferase (NAPRTase) family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 8DSM RCSB PDB: 8DSM PDBe: 8DSM

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Phosphate ionPO4

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.