ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1j5qB1 - ECOD Domain | ECOD

ECOD/Domains/e1j5qB1

e1j5qB1

UID: 000030751

PDB

Range: B:25-221
PDB: 1J5Q chain B(all domains)
UniProt: P30328 (all domains)
Gene: A430L

Molecule: Major capsid protein (MCP) (Vp54)

3D Structure

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Related Domains

Browse other domains in Capsid_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyCapsid_N(10.2.1.54)

Pfam Families

PF16903Capsid_N

Major capsid protein N-terminus

ClanCL0611Hexon

External Links

ECOD PDB View: 1J5Q RCSB PDB: 1J5Q PDBe: 1J5Q UniProt: P30328

Downloads

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