ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1m3yB2 - ECOD Domain | ECOD

ECOD/Domains/e1m3yB2

e1m3yB2

UID: 000030758

PDB

Range: B:222-437
PDB: 1M3Y chain B(all domains)
UniProt: P30328 (all domains)
Gene: A430L

Molecule: Major capsid protein (MCP) (Vp54)

3D Structure

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Related Domains

Browse other domains in Capsid_NCLDV →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyCapsid_NCLDV(10.2.1.41)

Pfam Families

PF04451Capsid_NCLDV

Large eukaryotic DNA virus major capsid protein

ClanCL0611Hexon

External Links

ECOD PDB View: 1M3Y RCSB PDB: 1M3Y PDBe: 1M3Y UniProt: P30328

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