ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8ffoD2 - ECOD Domain | ECOD

ECOD/Domains/e8ffoD2

e8ffoD2

UID: 003079278

PDB

Range: D:311-355,D:376-614
PDB: 8FFO chain D(all domains)

Molecule: Transient receptor potential cation channel subfamily V member 5

3D Structure

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Related Domains

Browse other domains in Ion_trans →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyIon_trans(5054.1.1.2)

Ligands

in contact, ≤ 4 Å

Palmitoyl-Linoleoyl PhosphatidylcholineCPL
drugDrugBank DB02306
ErgosterolERG
drugDrugBank DB04038

Pfam Families

PF00520Ion_trans

Ion transport protein

ClanCL0030Ion_channel

External Links

ECOD PDB View: 8FFO RCSB PDB: 8FFO PDBe: 8FFO

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

[(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate

Shown in the structure viewer. Drug annotations from DrugDomain.