ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1vpsC1 - ECOD Domain | ECOD

ECOD/Domains/e1vpsC1

e1vpsC1

UID: 000030808

PDB

Range: C:32-316
PDB: 1VPS chain C(all domains)
UniProt: P49302 (all domains)

Molecule: Capsid protein VP1

3D Structure

Loading viewer...

Related Domains

Browse other domains in Polyoma_coat →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyPolyoma_coat(10.2.1.6)

Pfam Families

PF00718Polyoma_coat

Polyomavirus coat protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 1VPS RCSB PDB: 1VPS PDBe: 1VPS UniProt: P49302

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure