ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8g4oC2 - ECOD Domain | ECOD

ECOD/Domains/e8g4oC2

e8g4oC2

UID: 003083654

PDB

Range: C:9-221
PDB: 8G4O chain C(all domains)

Molecule: Gamma-aminobutyric acid receptor subunit alpha-1

3D Structure

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Related Domains

Browse other domains in Neur_chan_LBD →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupNicotinic receptor ligand binding domain-like(11.12)

TT-groupNicotinic receptor ligand binding domain-like(11.12.1)

FFamilyNeur_chan_LBD(11.12.1.1)

Ligands

in contact, ≤ 4 Å

gamma-Aminobutyric acidABU
drugDrugBank DB02530
(5M)-1-(2-aminoethyl)-7-chloro-5-(2-fluorophenyl)-1,3-dihydro-2H-1,4-benzodiazepin-2-oneYNL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02931Neur_chan_LBD

Neurotransmitter-gated ion-channel ligand binding domain

ClanCL0974NLGIC_lig-bind

External Links

ECOD PDB View: 8G4O RCSB PDB: 8G4O PDBe: 8G4O

Downloads

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