ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8gn2x1 - ECOD Domain | ECOD

ECOD/Domains/e8gn2x1

e8gn2x1

UID: 003087805

PDB

Range: x:3-39
PDB: 8GN2 chain x(all domains)

Molecule: Photosystem II reaction center protein X

3D Structure

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Related Domains

Browse other domains in PsbX →

Classification

AArchitectureextended segments(a.20)

XX-groupPhotosystem II PsbX protein(3493)

HH-groupPhotosystem II PsbX protein(3493.1)

TT-groupPhotosystem II PsbX protein(3493.1.1)

FFamilyPsbX(3493.1.1.1)

Ligands

in contact, ≤ 4 Å

Chlorophyll ACLA
drugDrugBank DB02133
CryptoxanthinRRX
drugDrugBank DB15914
Heptyl 1-Thiohexopyranoside

Pfam Families

Photosystem II reaction centre X protein (PsbX)

External Links

ECOD PDB View: 8GN2 RCSB PDB: 8GN2 PDBe: 8GN2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB04450within 5 Å only

2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONEPL9

1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROLSQD

Unknown ligandUNL

Shown in the structure viewer. Drug annotations from DrugDomain.