ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8hlfB1 - ECOD Domain | ECOD

ECOD/Domains/e8hlfB1

e8hlfB1

UID: 003090404

PDB

Range: B:1-126
PDB: 8HLF chain B(all domains)

Molecule: Novel protein with potential Cupin domain

3D Structure

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Related Domains

Browse other domains in Cupin_2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyCupin_2(10.12.1.39)

Ligands

in contact, ≤ 4 Å

3-[dimethyl(oxidanyl)-$l^{4}-sulfanyl]propanoic acidLNI
MANGANESE (II) IONMN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07883Cupin_2

Cupin domain

ClanCL0029Cupin

External Links

ECOD PDB View: 8HLF RCSB PDB: 8HLF PDBe: 8HLF

Downloads

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