ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8i69A1 - ECOD Domain | ECOD

ECOD/Domains/e8i69A1

e8i69A1

UID: 003090992

PDB

Range: A:0-227
PDB: 8I69 chain A(all domains)

Molecule: Uracil-DNA glycosylase

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUracil-DNA glycosylase-like(7569)

HH-groupUracil-DNA glycosylase-like(7569.1)

TT-groupUracil-DNA glycosylase-like(7569.1.1)

FFamilyUDG(7569.1.1.1)

Ligands

in contact, ≤ 4 Å

5-FLUORO-2,6-DIOXO-1,2,3,6-TETRAHYDROPYRIMIDINE-4-CARBOXYLIC ACIDFOT

+ 2 additives (Citric acid, 1,2-ETHANEDIOL)

Citric acidCIT
DrugBank DB04272
1,2-ETHANEDIOLEDO

Pfam Families

Uracil DNA glycosylase superfamily

ClanCL0771UDG-like

External Links

ECOD PDB View: 8I69 RCSB PDB: 8I69 PDBe: 8I69

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.