ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8pbgA1 - ECOD Domain | ECOD

ECOD/Domains/e8pbgA1

e8pbgA1

UID: 003101075

PDB

Range: A:1466-1742,A:1797-1821
PDB: 8PBG chain A(all domains)

Molecule: CAD protein

3D Structure

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Related Domains

Browse other domains in Amidohydro_1, DHOase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAmidohydro_1, DHOase(2002.1.1.275)

Ligands

in contact, ≤ 4 Å

5-FLUORO-2,6-DIOXO-1,2,3,6-TETRAHYDROPYRIMIDINE-4-CARBOXYLIC ACIDFOT
Sodium ionNA
metal
Zinc ionZN
metal

Pfam Families

PF01979Amidohydro_1

Amidohydrolase family

ClanCL0036TIM_barrel

Dihydro-orotase-like

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 8PBG RCSB PDB: 8PBG PDBe: 8PBG

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Formic acid)

Formic acidFMT
DrugBank DB01942

Shown in the structure viewer. Drug annotations from DrugDomain.