ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8q1bL2 - ECOD Domain | ECOD

ECOD/Domains/e8q1bL2

e8q1bL2

UID: 003102335

PDB

Range: L:15-240
PDB: 8Q1B chain L(all domains)

Molecule: Probable mitochondrial-processing peptidase subunit beta

3D Structure

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Related Domains

Browse other domains in Peptidase_M16,Peptidase_M16_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupLuxS, MPP, ThrRS/AlaRS common domain(309)

HH-groupLuxS, MPP, ThrRS/AlaRS common domain(309.1)

TT-groupLuxS/MPP-like metallohydrolase(309.1.1)

FFamilyPeptidase_M16,Peptidase_M16_C(309.1.1.2)

Ligands

in contact, ≤ 4 Å

Colfosceril palmitatePCF
drugDrugBank DB09114within 5 Å only
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00675Peptidase_M16

Insulinase (Peptidase family M16)

ClanCL0094Peptidase_ME

PF05193Peptidase_M16_C

Peptidase M16 inactive domain

ClanCL0094Peptidase_ME

External Links

ECOD PDB View: 8Q1B RCSB PDB: 8Q1B PDBe: 8Q1B

Downloads

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