ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8shdb1 - ECOD Domain | ECOD

ECOD/Domains/e8shdb1

e8shdb1

UID: 003103670

PDB

Range: b:138-214,b:367-403
PDB: 8SHD chain b(all domains)

Molecule: T-complex protein 1 subunit beta

3D Structure

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Related Domains

Browse other domains in Cpn60_TCP1 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupGroEL-intermediate domain like(2498.5)

TT-groupGroEL-intermediate domain like(2498.5.1)

FFamilyCpn60_TCP1(2498.5.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Aluminum fluorideAF3
Magnesium ionMG

Pfam Families

PF00118Cpn60_TCP1

TCP-1/cpn60 chaperonin family

External Links

ECOD PDB View: 8SHD RCSB PDB: 8SHD PDBe: 8SHD

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.