ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1mec11 - ECOD Domain | ECOD

ECOD/Domains/e1mec11

e1mec11

UID: 000031103

PDB

Range: 1:1-268
PDB: 1MEC chain 1(all domains)
UniProt: P12296 (all domains)

Molecule: MENGO VIRUS COAT PROTEIN (SUBUNIT VP1)

3D Structure

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Related Domains

Browse other domains in Rhv_5 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyRhv_5(10.2.1.69)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Picornavirus coat protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 1MEC RCSB PDB: 1MEC PDBe: 1MEC UniProt: P12296

Downloads

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