ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vs3B1 - ECOD Domain | ECOD

ECOD/Domains/e1vs3B1

e1vs3B1

UID: 000311564

PDB

Range: B:1-249
PDB: 1VS3 chain B(all domains)
UniProt: Q5SHU9 (all domains)
Gene: truA

Molecule: tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA pseudouridine(38-40) synthase) (tRNA pseudouridylate synthase I) (tRNA-uridine isomerase I)

3D Structure

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Related Domains

Browse other domains in PseudoU_synth_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPseudouridine synthase(304.102)

TT-groupPseudouridine synthase(304.102.1)

FFamilyPseudoU_synth_1(304.102.1.3)

Pfam Families

PF01416PseudoU_synth_1

tRNA pseudouridine synthase

ClanCL0649PseudoU_synth

External Links

ECOD PDB View: 1VS3 RCSB PDB: 1VS3 PDBe: 1VS3 UniProt: Q5SHU9

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