ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1w39A1 - ECOD Domain | ECOD

ECOD/Domains/e1w39A1

e1w39A1

UID: 000031177

PDB

Range: A:27-189
PDB: 1W39 chain A(all domains)
UniProt: P03608 (all domains)

Molecule: Capsid protein (Coat protein) (Virion protein)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Tymo_coat →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyTymo_coat(10.2.1.15)

Pfam Families

PF00983Tymo_coat

Tymovirus coat protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 1W39 RCSB PDB: 1W39 PDBe: 1W39 UniProt: P03608

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure