ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2npiB2 - ECOD Domain | ECOD

ECOD/Domains/e2npiB2

e2npiB2

UID: 000311909

PDB

Range: B:102-337
PDB: 2NPI chain B(all domains)
UniProt: Q08685 (all domains)
Gene: CLP1

Molecule: Protein CLP1

3D Structure

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Related Domains

Browse other domains in CLP1_P →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyCLP1_P(2004.1.1.211)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

mRNA cleavage and polyadenylation factor CLP1 P-loop

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 2NPI RCSB PDB: 2NPI PDBe: 2NPI UniProt: Q08685

Downloads

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