ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2tnfC1 - ECOD Domain | ECOD

ECOD/Domains/e2tnfC1

e2tnfC1

UID: 000031272

PDB

Range: C:9-157
PDB: 2TNF chain C(all domains)
UniProt: P06804 (all domains)
Gene: Tnf

Molecule: PROTEIN (TUMOR NECROSIS FACTOR ALPHA)

3D Structure

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Related Domains

Browse other domains in TNF →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupTNF-like(10.3)

TT-groupTNF-like(10.3.1)

FFamilyTNF(10.3.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Isopropyl alcohol, Tromethamine)

Isopropyl alcoholIPA
DrugBank DB02325
TromethamineTRS
DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

TNF(Tumour Necrosis Factor) family

ClanCL0100C1q_TNF

External Links

ECOD PDB View: 2TNF RCSB PDB: 2TNF PDBe: 2TNF UniProt: P06804

Downloads

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