ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2odbA1 - ECOD Domain | ECOD

ECOD/Domains/e2odbA1

e2odbA1

UID: 000314091

PDB

Range: A:2-178
PDB: 2ODB chain A(all domains)
UniProt: P60953 (all domains)
Gene: CDC42

Molecule: Human Cell Division Cycle 42 (CDC42)

3D Structure

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Related Domains

Browse other domains in Ras →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyRas(2004.1.1.19)

Ligands

in contact, ≤ 4 Å

5'-GuanylylmethylenebisphosphonateGCP
drugDrugBank DB03725
Chloride ionCL
Magnesium ionMG

Pfam Families

Ras family

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 2ODB RCSB PDB: 2ODB PDBe: 2ODB UniProt: P60953

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.