ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O05052_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O05052_F1_nD1

O05052_F1_nD1

UID: 003164196

AlphaFold

Range: 1-250
AlphaFold: AF-O05052
UniProt: O05052 (all domains)
Gene: hsdR

Protein: Type I restriction enzyme HindI endonuclease subunit (HindI) (R protein) (EC 3.1.21.3) (Type I restriction enzyme HindVIIP endonuclease subunit)

3D Structure

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Related Domains

Browse other domains in HSDR_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyHSDR_N(2008.1.1.15)

Pfam Families

Type I restriction enzyme R protein N terminus (HSDR_N)

ClanCL0236PDDEXK

External Links

AlphaFold DB: O05052 UniProt: O05052

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-250