ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P43965_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P43965_F1_nD1

P43965_F1_nD1

UID: 003164568

AlphaFold

Range: 6-175
AlphaFold: AF-P43965
UniProt: P43965 (all domains)
Gene: HI_0217

Protein: Putative REP-associated tyrosine transposase

3D Structure

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Related Domains

Browse other domains in Y1_Tnp →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupOrigin of replication-binding domains(304.55)

TT-groupTransposase IS200-like(304.55.2)

FFamilyY1_Tnp(304.55.2.1)

Pfam Families

Transposase IS200 like

ClanCL0481HUH

External Links

AlphaFold DB: P43965 UniProt: P43965

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-175