ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P43870_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P43870_F1_nD1

P43870_F1_nD1

UID: 003165732

AlphaFold

Range: 6-255,276-300
AlphaFold: AF-P43870
UniProt: P43870 (all domains)
Gene: hindIIIR

Protein: Type II restriction enzyme HindIII (R.HindIII) (EC 3.1.21.4) (Endonuclease HindIII) (Type-2 restriction enzyme HindIII)

3D Structure

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Related Domains

Browse other domains in RE_HindIII →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyRE_HindIII(2008.1.1.46)

Pfam Families

PF09518RE_HindIII

HindIII restriction endonuclease

ClanCL0236PDDEXK

External Links

AlphaFold DB: P43870 UniProt: P43870

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-255,276-300