ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q57534_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q57534_F1_nD1

Q57534_F1_nD1

UID: 003165734

AlphaFold

Range: 1-78
AlphaFold: AF-Q57534
UniProt: Q57534 (all domains)
Gene: vapB1

Protein: Antitoxin VapB1

3D Structure

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Related Domains

Browse other domains in MazE_antitoxin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAbrB(1.1.3)

FFamilyMazE_antitoxin(1.1.3.2)

Pfam Families

PF04014MazE_antitoxin

Antidote-toxin recognition MazE, bacterial antitoxin

ClanCL0132AbrB

External Links

AlphaFold DB: Q57534 UniProt: Q57534

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-78