ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P44514_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P44514_F1_nD2

P44514_F1_nD2

UID: 003165762

AlphaFold

Range: 176-295
AlphaFold: AF-P44514
UniProt: P44514 (all domains)
Gene: dapE

Protein: Succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18) (N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase)

3D Structure

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Related Domains

Browse other domains in M20_dimer →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupBacterial exopeptidase dimerisation domain(304.25)

TT-groupBacterial exopeptidase dimerisation domain(304.25.1)

FFamilyM20_dimer(304.25.1.1)

Pfam Families

PF07687M20_dimer

Peptidase dimerisation domain

External Links

AlphaFold DB: P44514 UniProt: P44514

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 176-295