ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

P44039_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P44039_F1_nD1

P44039_F1_nD1

UID: 003165997

AlphaFold

Range: 1-155,301-335
AlphaFold: AF-P44039
UniProt: P44039 (all domains)
Gene: truD

Protein: tRNA pseudouridine synthase D (EC 5.4.99.27) (tRNA pseudouridine(13) synthase) (tRNA pseudouridylate synthase D) (tRNA-uridine isomerase D)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TruD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPseudouridine synthase(304.102)

TT-groupPseudouridine synthase(304.102.1)

FFamilyTruD(304.102.1.2)

Pfam Families

tRNA pseudouridine synthase D (TruD)

ClanCL0649PseudoU_synth

External Links

AlphaFold DB: P44039 UniProt: P44039

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-155,301-335