ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2hdbB1 - ECOD Domain | ECOD

ECOD/Domains/e2hdbB1

e2hdbB1

UID: 000316672

PDB

Range: B:1-166
PDB: 2HDB chain B(all domains)
UniProt: Q9FD71 (all domains)
Gene: mvaS

Molecule: HMG-CoA synthase

3D Structure

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Related Domains

Browse other domains in HMG_CoA_synt_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiolase-like(7581)

HH-groupThiolase-like(7581.1)

TT-groupThiolase-like(7581.1.1)

FFamilyHMG_CoA_synt_N(7581.1.1.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (2-(N-morpholino)ethanesulfonic acid, Sulfate ion)

2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF01154HMG_CoA_synt_N

Hydroxymethylglutaryl-coenzyme A synthase N terminal

ClanCL0046Thiolase

External Links

ECOD PDB View: 2HDB RCSB PDB: 2HDB PDBe: 2HDB UniProt: Q9FD71

Downloads

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Drug annotations from DrugDomain.