ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q04781_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q04781_F1_nD5

Q04781_F1_nD5

UID: 003167601

RepresentativeAlphaFold

Range: 1406-1500
AlphaFold: AF-Q04781
UniProt: Q04781 (all domains)
Gene: RKR1

Protein: E3 ubiquitin-protein ligase listerin (EC 2.3.2.27) (RING domain mutant killed by rtf1 deletion protein 1) (RING-type E3 ubiquitin transferase listerin)

3D Structure

Loading viewer...

Related Domains

Browse other domains in UBC_like →

Classification

AArchitecturea+b two layers(a.11)

XX-groupUBC-like(216)

HH-groupUBC-like(216.1)

TT-groupUBC-like(216.1.1)

FFamilyUBC_like(216.1.1.20)

Pfam Families

PF23009UBC_like

Ubiquitin conjugating domain-like

ClanCL0208UBC

External Links

AlphaFold DB: Q04781 UniProt: Q04781

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1406-1500