ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P29468_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/P29468_F1_nD3

P29468_F1_nD3

UID: 003167668

AlphaFold

Range: 356-525
AlphaFold: AF-P29468
UniProt: P29468 (all domains)
Gene: PAP1

Protein: Poly(A) polymerase (PAP) (EC 2.7.7.19) (Polynucleotide adenylyltransferase)

3D Structure

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Related Domains

Browse other domains in PAP_RNA-bind →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPAP/Archaeal CCA-adding enzyme, C-terminal domain(304.20)

TT-groupPAP/Archaeal CCA-adding enzyme, C-terminal domain(304.20.1)

FFamilyPAP_RNA-bind(304.20.1.1)

Pfam Families

PF04926PAP_RNA-bind

Poly(A) polymerase predicted RNA binding domain

External Links

AlphaFold DB: P29468 UniProt: P29468

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 356-525