ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P38319_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P38319_F1_nD2

P38319_F1_nD2

UID: 003167937

AlphaFold

Range: 286-540
AlphaFold: AF-P38319
UniProt: P38319 (all domains)
Gene: TDP1

Protein: Tyrosyl-DNA phosphodiesterase 1 (Tyr-DNA phosphodiesterase 1) (EC 3.1.4.-)

3D Structure

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Related Domains

Browse other domains in Tyr-DNA_phospho →

Classification

AArchitecturea+b three layers(a.12)

XX-groupPhospholipase D/nuclease(300)

HH-groupPhospholipase D/nuclease(300.1)

TT-groupPhospholipase D/nuclease(300.1.1)

FFamilyTyr-DNA_phospho(300.1.1.3)

Pfam Families

PF06087Tyr-DNA_phospho

Tyrosyl-DNA phosphodiesterase

ClanCL0479PLD

External Links

AlphaFold DB: P38319 UniProt: P38319

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 286-540