ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q04048_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q04048_F1_nD1

Q04048_F1_nD1

UID: 003167982

AlphaFold

Range: 16-400
UniProt: Q04048 (all domains)
Gene: SYF1

Protein: Pre-mRNA-splicing factor SYF1 (PRP19-associated complex protein 90) (Synthetic lethal with CDC40 protein 1)

3D Structure

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Related Domains

Browse other domains in HAT_Syf1_M, HAT_Syf1_CNRKL1_N →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyHAT_Syf1_M, HAT_Syf1_CNRKL1_N(109.4.1.1677)

Pfam Families

PF23220HAT_Syf1_M

Pre-mRNA-splicing factor SYF1 middle HAT repeat

ClanCL0020TPR

PF23233HAT_Syf1_CNRKL1_N

Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat

ClanCL0020TPR

External Links

UniProt: Q04048

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