ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P17255_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/P17255_F1_nD4

P17255_F1_nD4

UID: 003168737

AlphaFold

Range: 466-580
UniProt: P17255 (all domains)
Gene: VMA1

Protein: V-type proton ATPase catalytic subunit A (V-ATPase subunit A) (EC 7.1.2.2) (Vacuolar proton pump subunit A) [Cleaved into: Endonuclease PI-SceI (EC 3.1.-.-) (Sce VMA intein) (VMA1-derived endonuclease) (VDE)]

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupHoming endonucleases-like(242)

HH-groupHoming endonucleases(242.1)

TT-groupHoming endonucleases(242.1.1)

FFamilyHom_end(242.1.1.3)

Pfam Families

PF05204Hom_end

Homing endonuclease

ClanCL0324Homing_endonuc

External Links

UniProt: P17255

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