ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P38279_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P38279_F1_nD1

P38279_F1_nD1

UID: 003169995

AlphaFold

Range: 6-105,166-185
AlphaFold: AF-P38279
UniProt: P38279 (all domains)
Gene: RTC2

Protein: Vacuolar histidine transporter YPQ3 (PQ-loop repeat-containing protein 3) (Protein RTC2) (Restriction of telomere capping protein 2)

3D Structure

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Related Domains

Browse other domains in PQ-loop →

Classification

AArchitecturealpha duplicates or obligate multimers(a.8)

XX-groupTOG superfamily(6155)

HH-groupSWEET transporter(6155.1)

TT-groupSWEET transporter(6155.1.1)

FFamilyPQ-loop(6155.1.1.2)

Pfam Families

PF04193PQ-loop

PQ loop repeat

ClanCL0141MtN3-like

External Links

AlphaFold DB: P38279 UniProt: P38279

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-105,166-185