ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

P53970_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P53970_F1_nD1

P53970_F1_nD1

UID: 003170077

AlphaFold

Range: 6-245
AlphaFold: AF-P53970
UniProt: P53970 (all domains)
Gene: EFM6

Protein: Protein-lysine N-methyltransferase EFM6 (EC 2.1.1.-) (Elongation factor methyltransferase 6)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Methyltransf_16 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_16(2003.1.5.73)

Pfam Families

PF10294Methyltransf_16

Lysine methyltransferase

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: P53970 UniProt: P53970

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-245