ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q12208_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q12208_F1_nD1

Q12208_F1_nD1

UID: 003171006

AlphaFold

Range: 76-290
AlphaFold: AF-Q12208
UniProt: Q12208 (all domains)
Gene: USB1

Protein: U6 snRNA phosphodiesterase 1 (3'-5' RNA exonuclease USB1) (EC 4.6.1.-) (Cyclic phosphodiesterase USB1) (EC 3.1.4.-) (U six biogenesis protein 1)

3D Structure

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Related Domains

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Classification

AArchitecturebeta barrels(a.1)

XX-groupLigT-like(264)

HH-groupLigT-related(264.1)

TT-groupLigT-related(264.1.1)

FFamilyHVSL(264.1.1.6)

Pfam Families

Uncharacterised conserved protein

ClanCL02472H

External Links

AlphaFold DB: Q12208 UniProt: Q12208

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 76-290