ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P39685_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P39685_F1_nD1

P39685_F1_nD1

UID: 003171614

RepresentativeAlphaFold

Range: 96-195
AlphaFold: AF-P39685
UniProt: P39685 (all domains)
Gene: POM152

Protein: Nucleoporin POM152 (Nuclear pore protein POM152) (P150) (Pore membrane protein POM152)

3D Structure

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Related Domains

Browse other domains in TMD_POM152 →

Classification

AArchitectureextended segments(a.20)

XX-groupSensor proteins transmembrane domains(5043)

HH-groupHtr2 transmembrane domain-like(5043.1)

TT-groupHtr2 transmembrane domain-like(5043.1.1)

FFamilyTMD_POM152(5043.1.1.20)

Pfam Families

PF24097TMD_POM152

Nucleoporin POM152, N-terminal transmembrane domain

External Links

AlphaFold DB: P39685 UniProt: P39685

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 96-195