ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P53960_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P53960_F1_nD2

P53960_F1_nD2

UID: 003172183

AlphaFold

Range: 116-280
AlphaFold: AF-P53960
UniProt: P53960 (all domains)
Gene: YNL040W

Protein: Putative alanyl-tRNA editing protein alaX (AlaX) (AlaXp) (AlaXp-II) (Alanyl-tRNA deacylase alaX)

3D Structure

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Related Domains

Browse other domains in tRNA_SAD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupLuxS, MPP, ThrRS/AlaRS common domain(309)

HH-groupLuxS, MPP, ThrRS/AlaRS common domain(309.1)

TT-groupThrRS/AlaRS editing domain(309.1.2)

FFamilytRNA_SAD(309.1.2.1)

Pfam Families

PF07973tRNA_SAD

Threonyl and Alanyl tRNA synthetase second additional domain

ClanCL0094Peptidase_ME

External Links

AlphaFold DB: P53960 UniProt: P53960

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 116-280