ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q12383_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q12383_F1_nD1

Q12383_F1_nD1

UID: 003172336

AlphaFold

Range: 16-55
AlphaFold: AF-Q12383
UniProt: Q12383 (all domains)
Gene: TRM13

Protein: tRNA:m(4)X modification enzyme TRM13 (EC 2.1.1.225) (tRNA methylase 13)

3D Structure

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Related Domains

Browse other domains in zf-TRM13_CCCH →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupGlucocorticoid receptor-like(377)

HH-groupPrimase zinc finger(377.13)

TT-groupPrimase zinc finger(377.13.1)

FFamilyzf-TRM13_CCCH(377.13.1.5)

Pfam Families

PF11722zf-TRM13_CCCH

CCCH zinc finger in TRM13 protein

External Links

AlphaFold DB: Q12383 UniProt: Q12383

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-55