ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P38254_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/P38254_F1_nD4

P38254_F1_nD4

UID: 003174720

AlphaFold

Range: 406-505,533-745
AlphaFold: AF-P38254
UniProt: P38254 (all domains)
Gene: PBY1

Protein: Probable tubulin--tyrosine ligase PBY1 (EC 6.3.2.25) (P-body-associated protein 1)

3D Structure

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Related Domains

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Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupATP-grasp(206.1.3)

FFamilyTTL(206.1.3.12)

Pfam Families

Tubulin-tyrosine ligase family

ClanCL0179ATP-grasp

External Links

AlphaFold DB: P38254 UniProt: P38254

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 406-505,533-745