ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q04675_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q04675_F1_nD1

Q04675_F1_nD1

UID: 003174811

AlphaFold

Range: 6-128
AlphaFold: AF-Q04675
UniProt: Q04675 (all domains)
Gene: SEN15

Protein: tRNA-splicing endonuclease subunit SEN15 (Splicing endonuclease of 15 kDa) (tRNA-intron endonuclease SEN15)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Sen15 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-grouptRNA-intron endonuclease catalytic domain-like(2008.2)

TT-grouptRNA-intron endonuclease catalytic domain-like(2008.2.1)

FFamilySen15(2008.2.1.2)

Pfam Families

Sen15 protein

ClanCL0236PDDEXK

External Links

AlphaFold DB: Q04675 UniProt: Q04675

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-128