ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P49957_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P49957_F1_nD1

P49957_F1_nD1

UID: 003175282

AlphaFold

Range: 1-165,241-279
AlphaFold: AF-P49957
UniProt: P49957 (all domains)
Gene: TRM9

Protein: tRNA (carboxymethyluridine(34)-5-O)-methyltransferase (EC 2.1.1.229) (tRNA (uracil-5-)-methyltransferase TRM9) (tRNA [Um34] methyltransferase) (tRNA methylase 9)

3D Structure

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Related Domains

Browse other domains in Methyltransf_11 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_11(2003.1.5.66)

Pfam Families

PF08241Methyltransf_11

Methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: P49957 UniProt: P49957

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-165,241-279