ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

P38257_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P38257_F1_nD2

P38257_F1_nD2

UID: 003176422

AlphaFold

Range: 351-360,391-610
AlphaFold: AF-P38257
UniProt: P38257 (all domains)
Gene: MMS4

Protein: Crossover junction endonuclease MMS4 (EC 3.1.22.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in ERCC4 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyERCC4(2008.1.1.7)

Pfam Families

ERCC4 domain

ClanCL0236PDDEXK

External Links

AlphaFold DB: P38257 UniProt: P38257

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 351-360,391-610