ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P40072_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P40072_F1_nD1

P40072_F1_nD1

UID: 003177365

AlphaFold

Range: 201-260
AlphaFold: AF-P40072
UniProt: P40072 (all domains)
Gene: SLX8

Protein: E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX8 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase SLX8) (Synthetic lethal of unknown function protein 8)

3D Structure

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Related Domains

Browse other domains in zf-C3HC4 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-C3HC4(376.1.1.1)

Pfam Families

PF00097zf-C3HC4

Zinc finger, C3HC4 type (RING finger)

ClanCL0229RING

External Links

AlphaFold DB: P40072 UniProt: P40072

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 201-260