ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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U7PSM7_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/U7PSM7_F1_nD3

U7PSM7_F1_nD3

UID: 003181239

AlphaFold

Range: 156-245,271-440
AlphaFold: AF-U7PSM7
UniProt: U7PSM7 (all domains)
Gene: HMPREF1624_05440

Protein: arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase)

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1d →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1d(2005.1.1.7)

Pfam Families

PF00750tRNA-synt_1d

tRNA synthetases class I (R), catalytic domain

ClanCL0039HUP

External Links

AlphaFold DB: U7PSM7 UniProt: U7PSM7

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 156-245,271-440