ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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U7PMS8_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/U7PMS8_F1_nD2

U7PMS8_F1_nD2

UID: 003187218

AlphaFold

Range: 296-315,576-755
AlphaFold: AF-U7PMS8
UniProt: U7PMS8 (all domains)
Gene: HMPREF1624_07575

Protein: Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 (EC 3.6.4.13)

3D Structure

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Related Domains

Browse other domains in Helicase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyHelicase_C(2004.1.1.30)

Pfam Families

PF00271Helicase_C

Helicase conserved C-terminal domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: U7PMS8 UniProt: U7PMS8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 296-315,576-755