ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

U7PYD4_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/U7PYD4_F1_nD3

U7PYD4_F1_nD3

UID: 003188028

AlphaFold

Range: 371-525,556-630
AlphaFold: AF-U7PYD4
UniProt: U7PYD4 (all domains)
Gene: HMPREF1624_03295

Protein: TRUD domain-containing protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in TruD →

Classification

AArchitecturea+b two layers(a.11)

XX-grouptRNA pseudouridine synthase TruD insertion domain(1056)

HH-grouptRNA pseudouridine synthase TruD insertion domain(1056.1)

TT-grouptRNA pseudouridine synthase TruD insertion domain(1056.1.1)

FFamilyTruD(1056.1.1.1)

Pfam Families

tRNA pseudouridine synthase D (TruD)

ClanCL0649PseudoU_synth

External Links

AlphaFold DB: U7PYD4 UniProt: U7PYD4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 371-525,556-630