ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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U7PV33_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/U7PV33_F1_nD1

U7PV33_F1_nD1

UID: 003189705

AlphaFold

Range: 6-345,471-540
AlphaFold: AF-U7PV33
UniProt: U7PV33 (all domains)
Gene: HMPREF1624_04688

Protein: Rab proteins geranylgeranyltransferase

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyGDI(2003.1.2.9)

Pfam Families

GDP dissociation inhibitor

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: U7PV33 UniProt: U7PV33

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-345,471-540