ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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U7Q2D5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/U7Q2D5_F1_nD1

U7Q2D5_F1_nD1

UID: 003190059

AlphaFold

Range: 1-105
AlphaFold: AF-U7Q2D5
UniProt: U7Q2D5 (all domains)
Gene: YTM1

Protein: Ribosome biogenesis protein YTM1

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyNLE(221.1.1.31)

Pfam Families

NLE (NUC135) domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: U7Q2D5 UniProt: U7Q2D5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-105