ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C0NBN9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/C0NBN9_F1_nD2

C0NBN9_F1_nD2

UID: 003198646

AlphaFold

Range: 651-845
AlphaFold: AF-C0NBN9
UniProt: C0NBN9 (all domains)
Gene: HCBG_00535

Protein: Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 (EC 3.6.4.13)

3D Structure

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Related Domains

Browse other domains in HA2_N,HA2_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupSec63 N-terminal subdomain-like(4156)

HH-groupSec63 N-terminal subdomain-like(4156.1)

TT-groupSec63 N-terminal subdomain-like(4156.1.1)

FFamilyHA2_N,HA2_C(4156.1.1.2)

Pfam Families

PF04408WHD_HA2

Helicase associated domain (HA2), winged-helix

ClanCL0123HTH

Helicase associated domain (HA2), ratchet-like

External Links

AlphaFold DB: C0NBN9 UniProt: C0NBN9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 651-845