ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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C0NSR9_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/C0NSR9_F1_nD3

C0NSR9_F1_nD3

UID: 003201448

AlphaFold

Range: 486-530
AlphaFold: AF-C0NSR9
UniProt: C0NSR9 (all domains)
Gene: HCBG_06199

Protein: Polyubiquitin

3D Structure

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Related Domains

Browse other domains in Ribosomal_L40e →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyRibosomal_L40e(375.1.1.6)

Pfam Families

PF01020Ribosomal_L40e

Ribosomal L40e family

ClanCL0167Zn_Beta_Ribbon

External Links

AlphaFold DB: C0NSR9 UniProt: C0NSR9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 486-530