ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C0NFB5_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/C0NFB5_F1_nD4

C0NFB5_F1_nD4

UID: 003203609

RepresentativeAlphaFold

Range: 506-685
AlphaFold: AF-C0NFB5
UniProt: C0NFB5 (all domains)
Gene: HCBG_01581

Protein: Probable vacuolar protein sorting-associated protein 16 homolog

3D Structure

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Related Domains

Browse other domains in Vps16_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupNuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains(109.26)

TT-groupNuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains(109.26.1)

FFamilyVps16_C(109.26.1.11)

Pfam Families

PF04840Vps16_C

Vps16, C-terminal region

ClanCL0020TPR

External Links

AlphaFold DB: C0NFB5 UniProt: C0NFB5

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 506-685