ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C0NQL5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/C0NQL5_F1_nD2

C0NQL5_F1_nD2

UID: 003204305

AlphaFold

Range: 561-1325
AlphaFold: AF-C0NQL5
UniProt: C0NQL5 (all domains)
Gene: HCBG_05295

Protein: Nuclear pore complex subunit Nup133

3D Structure

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Related Domains

Browse other domains in Nucleoporin_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupNuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains(109.26)

TT-groupNuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains(109.26.1)

FFamilyNucleoporin_C(109.26.1.1)

Pfam Families

PF03177Nucleoporin_C

Non-repetitive/WGA-negative nucleoporin C-terminal

ClanCL0020TPR

External Links

AlphaFold DB: C0NQL5 UniProt: C0NQL5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 561-1325